MRIQC: individual T1w report

Summary

  • BIDS filename: sub-6044_ses-1_T1w.
  • Date and time: 2024-04-12, 17:09.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Detected a zero-filled frame, has the original image been rotated?

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.4416324528630499
cnr2.9761938225354982
efc0.5918928253841406
fber4407.524441197955
fwhmavg3.210243333333333
fwhmx3.02429
fwhmy3.45823
fwhmz3.14821
icvscsf0.19196606236482078
icvsgm0.4225839678768201
icvswm0.3854499697583591
inumed1.2689013481140137
inurange0.280810683965683
qi10.0
qi20.009826195442926068
rpvecsf26.186012296329178
rpvegm12.776775893971584
rpvewm17.307056949362405
sizex176
sizey256
sizez256
snrcsf0.7746477709419436
snrgm8.549919014919977
snrtotal8.798066577043187
snrwm17.069632945267642
snrdcsf57.908024510084324
snrdgm82.41113691201294
snrdtotal86.21465474752658
snrdwm118.32480282048245
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk1369.0743099016634
summarybgmad5.5370965784884465
summarybgmean13.212757004990186
summarybgmedian11.143907327204943
summarybgn3157765.0
summarybgp053.6744775511324406
summarybgp9531.986025895923376
summarybgstdv18.243871507153376
summarycsfk0.2736434855293042
summarycsfmad190.36002188787296
summarycsfmean779.7387601222476
summarycsfmedian489.4283623434603
summarycsfn6500.0
summarycsfp05220.88429069258274
summarycsfp952126.634001386352
summarycsfstdv631.7590147644648
summarygmk0.40605182266674333
summarygmmad79.03758825745605
summarygmmean699.8160239194857
summarygmmedian696.5243266187608
summarygmn17829.0
summarygmp05570.8692418374121
summarygmp95837.9374987341462
summarygmstdv81.4633204903502
summarywmk1.8164286717064595
summarywmmad55.01373374756263
summarywmmean1000.7541212247521
summarywmmedian1000.0602672770619
summarywmn224650.0
summarywmp05906.8128697499633
summarywmp951095.6569209434092
summarywmstdv58.58696813590861
tpmoverlapcsf0.1317557841539383
tpmoverlapgm0.42626431584358215
tpmoverlapwm0.4904327392578125
wm2max0.4027558768588826
AcquisitionDuration318.42
AcquisitionMatrixPE256
AcquisitionNumber1
AcquisitionTime13:27:31.460000
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
CoilStringHeadNeck_64
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20220720
Dcm2bidsVersion2.1.7
DeviceSerialNumber67034
DwellTime6.1e-06
EchoTime0.0024
FlipAngle9
ImageOrientationPatientDICOM[0.0167244, 0.99986, 2.77888e-08, 0.0890365, -0.00148927, -0.996027]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'NONE']
ImageTypeText['ORIGINAL', 'PRIMARY', 'M', 'NORM', 'DIS2D']
ImagingFrequency123.263
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InversionTime0.9
MRAcquisitionType3D
MTStateTrue
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNameMAGNETOM Prisma Fit
MatrixCoilModeGRAPPA
ModalityMR
NonlinearGradientCorrectionTrue
ParallelAcquisitionTechniqueGRAPPA
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseResolution1
PixelBandwidth320
ProtocolNameMPRAGE_SAG_1mm_iPAT2
PulseSequenceDetails%SiemensSeq%\tfl
PulseSequenceName*tfl3d1_16ns
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE24
RepetitionTime2.3
ScanOptionsIR
ScanningSequenceGR\IR
SequenceVariantSK\SP\MP
SeriesDescriptionMPRAGE_SAG_1mm_iPAT2
SeriesNumber14
ShimSetting[2639, 5396, -7363, 42, 34, -713, 81, -298]
SliceThickness1
SoftwareVersionssyngo MR XA30
StationNameMRC35427
TxRefAmp284.043
md5sum6da8494f9a09f03631600807184c6411
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.